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1

Gating at the Selectivity Filter of Ion Channels that Conduct Na+ and K+ Ions

Furini, Simone, Domene, Carmen

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 1.24 MB

english, 2011

2

A rapid method for measuring intraocular lens power in vitro with a focimeter

García-Domene, Mari Carmen, Díez-Ajenjo, María Amparo, Peris-Martínez, Cristina, Navea, Amparo, Artigas, José María

Journal:

Experimental Eye Research

Year:

2015

Language:

english

File:

PDF, 472 KB

english, 2015

3

Capturing the Molecular Mechanism of Anesthetic Action by Simulation Methods

Oakes, Victoria, Domene, Carmen

Journal:

Chemical Reviews

Year:

2018

Language:

english

File:

PDF, 1.79 MB

english, 2018

4

Metastasizing basal cell carcinoma of the skin with myelophthisic anemia

Domenic F. Coletta, Frederick E. Haentze, Carmen C. Thomas

Journal:

Year:

1968

Language:

english

File:

PDF, 3.31 MB

english, 1968

5

A Unified Orbital Model of Delocalised and Localised Currents in Monocycles, from Annulenes to Azabora-heterocycles

Alessandro Soncini, Carmen Domene, Jeroen J. Engelberts, Patrick W. Fowler, André Rassat, Joop H. van Lenthe, Remco W. A. Havenith, Leonardus W. Jenneskens

Journal:

Chemistry - A European Journal

Year:

2005

Language:

english

File:

PDF, 255 KB

english, 2005

6

On the Lack of Ring-Current Aromaticity of (Heteroatom) [N]Radialenes and their Dianions

Carmen Domene, Patrick W. Fowler, Leonardus W. Jenneskens, Erich Steiner

Journal:

Chemistry - A European Journal

Year:

2007

Language:

english

File:

PDF, 290 KB

english, 2007

7

Aromaticity of anthranil and its isomers, 1,2-benzisoxazole and benzoxazole

Carmen Domene, Leonardus W. Jenneskens, Patrick W. Fowler

Journal:

Tetrahedron Letters

Year:

2005

Language:

english

File:

PDF, 908 KB

english, 2005

8

Application of density functional theory to calculation of in-crystal anionic polarizability

Carmen Domene, Patrick W. Fowler, Patrick J̈emmer, Paul Madden

Journal:

Chemical Physics Letters

Year:

1999

Language:

english

File:

PDF, 142 KB

english, 1999

9

Conformational sampling and dynamics of membrane proteins from 10-nanosecond computer simulations

José D. Faraldo-Gómez, Lucy R. Forrest, Marc Baaden, Peter J. Bond, Carmen Domene, George Patargias, Jonathan Cuthbertson, Mark S.P. Sansom

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2004

Language:

english

File:

PDF, 475 KB

english, 2004

10

Permeation of water through the KcsA K+ channel

Simone Furini, Oliver Beckstein, Carmen Domene

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 479 KB

english, 2009

11

Effects of point mutations in pVHL on the binding of HIF-1α

Carmen Domene, Christopher J. R. Illingworth

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2012

Language:

english

File:

PDF, 1.19 MB

english, 2012

12

KcsA closed and open: modelling and simulation studies

John Holyoake, Carmen Domene, Joanne N. Bright, Mark S. P. Sansom

Journal:

European Biophysics Journal

Year:

2004

Language:

english

File:

PDF, 488 KB

english, 2004

13

Partition coefficients of indoles and betacarbolines

Pilar Guardado, Manuel Balon, Carmen Carmona, Maria A. Muñoz, Carmen Domene

Journal:

Journal of Pharmaceutical Sciences

Year:

1997

Language:

english

File:

PDF, 106 KB

english, 1997

14

Molecular dynamics simulations of potassium channels

Journal:

Central European Journal of Chemistry

Year:

2007

Language:

english

File:

PDF, 1.18 MB

english, 2007

15

Calculation of Dipole-Shielding Polarizabilities (σαβγI): The Influence of Uniform Electric Field Effects on the Shielding of Backbone Nuclei in Proteins

Boyd, Jonathan, Domene, Carmen, Redfield, Christina, Ferraro, Marta B., Lazzeretti, Paolo

Journal:

Journal of the American Chemical Society

Year:

2003

Language:

english

File:

PDF, 81 KB

english, 2003

16

Molecular Dynamics Simulations of the TrkH Membrane Protein

Domene, Carmen, Furini, Simone

Journal:

Year:

2012

Language:

english

File:

PDF, 3.64 MB

english, 2012

17

Two Different Conformational States of the KirBac3.1 Potassium Channel Revealed by Electron Crystallography

Anling Kuo, Carmen Domene, Louise N. Johnson, Declan A. Doyle, Catherine Vénien-Bryan

Journal:

Year:

2005

Language:

english

File:

PDF, 816 KB

english, 2005

18

Structural Basis for Binding of Hypoxia-Inducible Factor to the Oxygen-Sensing Prolyl Hydroxylases

Rasheduzzaman Chowdhury, Michael A. McDonough, Jasmin Mecinović, Christoph Loenarz, Emily Flashman, Kirsty S. Hewitson, Carmen Domene, Christopher J. Schofield

Journal:

Year:

2009

Language:

english

File:

PDF, 1.38 MB

english, 2009

19

Role of geometrical relaxation in solution of simple molecules exhibiting anomeric effects

Enrique Sánchez Marcos, Rafael R. Pappalardo, JoséLuis Chiara, M.Carmen Domene, JoséM. Martinez, Ramón M. Parrondo

Journal:

Journal of Molecular Structure: THEOCHEM

Year:

1996

Language:

english

File:

PDF, 940 KB

english, 1996

20

Conformational Dynamics of M2 Helices in KirBac Channels: Helix Flexibility in Relation to Gating via Molecular Dynamics Simulations†

Grottesi, Alessandro, Domene, Carmen, Hall, Benjamin, Sansom, Mark S. P.

Journal:

Year:

2005

Language:

english

File:

PDF, 410 KB

english, 2005

21

Residual astigmatism produced by toric intraocular lens rotation

Adelina Felipe, José M. Artigas, Amparo Díez-Ajenjo, Carmen García-Domene, Pablo Alcocer

Journal:

Journal of Cataract & Refractive Surgery

Year:

2011

Language:

english

File:

PDF, 345 KB

english, 2011

22

Dynamics, Energetics, and Selectivity of the Low-K+ KcsA Channel Structure

Carmen Domene, Simone Furini

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 651 KB

english, 2009

23

Selectivity and Permeation of Alkali Metal Ions in K+-channels

Simone Furini, Carmen Domene

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.64 MB

english, 2011

24

Ion channel gating: insights via molecular simulations

Oliver Beckstein, Philip C Biggin, Peter Bond, Joanne N Bright, Carmen Domene, Alessandro Grottesi, John Holyoake, Mark S.P Sansom

Journal:

Year:

2003

Language:

english

File:

PDF, 435 KB

english, 2003

25

Assessment of reliability in the clinical evaluation of depressive symptoms among multiple investigators in a multicenter clinical trial

Enrique Baca-García, Carlos Blanco, Jerónimo Sáiz-Ruiz, Fernando Rico, Carmen Diaz-Sastre, Domenic V. Cicchetti

Journal:

Psychiatry Research

Year:

2001

Language:

english

File:

PDF, 98 KB

english, 2001

26

[Advances in Protein Chemistry] Protein Simulations Volume 66 || Membrane Protein Simulations: Ion Channels And Bacterial Outer Membrane Proteins

Year:

2003

Language:

english

File:

PDF, 27 KB

english, 2003

27

Structural and biochemical analyses reveal how ornithine acetyl transferase binds acidic and basic amino acid substrates

Iqbal, Aman, Clifton, Ian. J., Chowdhury, Rasheduzzaman, Ivison, David, Domene, Carmen, Schofield, Christopher J.

Journal:

Organic & Biomolecular Chemistry

Year:

2011

Language:

english

File:

PDF, 1.49 MB

english, 2011

28

Potassium Channel, Ions, and Water: Simulation Studies Based on the High Resolution X-Ray Structure of KcsA

Domene, Carmen, Sansom, Mark S.P.

Journal:

Biophysical Journal

Year:

2003

Language:

english

File:

PDF, 635 KB

english, 2003

29

A Multiscale Model To Analyze the Sliding Movement of Repressor Proteins on DNA

Furini, Simone, Domene, Carmen, Cavalcanti, Silvio

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 66 KB

english, 2010

30

A limited feedback scheme based on spatially correlated channels for coordinated multipoint systems

Domene, Fernando, Piñero, Gema, Botella, Carmen, Gonzalez, Alberto

Journal:

EURASIP Journal on Wireless Communications and Networking

Year:

2012

Language:

english

File:

PDF, 342 KB

english, 2012

31

Lipid-Protein Interactions of Integral Membrane Proteins: A Comparative Simulation Study

Deol, Sundeep S., Bond, Peter J., Domene, Carmen, Sansom, Mark S.P.

Journal:

Biophysical Journal

Year:

2004

Language:

english

File:

PDF, 588 KB

english, 2004

32

Modeling of an Ion Channel in Its Open Conformation

Domene, Carmen, Doyle, Declan A., Vénien-Bryan, Catherine

Journal:

Biophysical Journal

Year:

2005

Language:

english

File:

PDF, 231 KB

english, 2005

33

Role of Aromatic Localization in the Gating Process of a Potassium Channel

Domene, Carmen, Vemparala, Satyavani, Klein, Michael L., Vénien-Bryan, Catherine, Doyle, Declan A.

Journal:

Biophysical Journal

Year:

2006

Language:

english

File:

PDF, 147 KB

english, 2006

34

Anionic Phospholipid Interactions with the Potassium Channel KcsA: Simulation Studies

Deol, Sundeep S., Domene, Carmen, Bond, Peter J., Sansom, Mark S.P.

Journal:

Biophysical Journal

Year:

2006

Language:

english

File:

PDF, 457 KB

english, 2006

35

Interaction of Anesthetics with Open and Closed Conformations of a Potassium Channel Studied via Molecular Dynamics and Normal Mode Analysis

Vemparala, Satyavani, Domene, Carmen, Klein, Michael L.

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 1000 KB

english, 2008

36

Model-Based Prediction of the α-Hemolysin Structure in the Hexameric State

Furini, Simone, Domene, Carmen, Rossi, Michele, Tartagni, Marco, Cavalcanti, Silvio

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 462 KB

english, 2008

37

Filter Flexibility and Distortion in a Bacterial Inward Rectifier K+ Channel: Simulation Studies of KirBac1.1

Domene, Carmen, Grottesi, Alessandro, Sansom, Mark S.P.

Journal:

Biophysical Journal

Year:

2004

Language:

english

File:

PDF, 578 KB

english, 2004

38

Lipid/Protein Interactions and the Membrane/Water Interfacial Region

Domene, Carmen, Bond, Peter J., Deol, Sundeep S., Sansom, Mark S. P.

Journal:

Journal of the American Chemical Society

Year:

2003

Language:

english

File:

PDF, 156 KB

english, 2003

39

K+ and Na+ Conduction in Selective and Nonselective Ion Channels Via Molecular Dynamics Simulations

Furini, Simone, Domene, Carmen

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 583 KB

english, 2013

40

Structure and Immunogenicity of a Peptide Vaccine, Including the Complete HIV-1 gp41 2F5 Epitope

Serrano, Soraya, Araujo, Aitziber, Apellániz, Beatriz, Bryson, Steve, Carravilla, Pablo, de la Arada, Igor, Huarte, Nerea, Rujas, Edurne, Pai, Emil F., Arrondo, José L. R., Domene, Carmen, Jiménez, Ma

Journal:

Journal of Biological Chemistry

Year:

2014

Language:

english

File:

PDF, 7.82 MB

english, 2014

41

On Conduction and Permeation in a Bacterial Sodium Channel

Domene, Carmen, Furini, Simone

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 36 KB

english, 2013

42

Fusogenic Activity of the HIV-1 Gp41 MPER-TMD Region: Mechanism and Targeting by Immunogens and Inhibitors

Nieva, Jose L., Apellaniz, Beatriz, Domene, Carmen, Huarte, Nerea, Largo, Eneko

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 40 KB

english, 2013

43

Obituary.

Nieva, Jose L., Apellaniz, Beatriz, Domene, Carmen, Huarte, Nerea, Largo, Eneko

Journal:

Year:

1894

Language:

english

File:

PDF, 419 KB

english, 1894

44

Strong and weak zinc binding sites in human zinc-α2-glycoprotein

Kumar, Aditya Arun, Hati, Debolina, Thaker, Thana’a Mohajer, Miah, Layeque, Cunningham, Phil, Domene, Carmen, Bui, Tam T.T., Drake, Alex F., McDermott, Lindsay C.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.06 MB

english, 2013

45

Effects of the Protonation States of the EEEE Motif of a Bacterial Na+-Channel on Conduction and Pore Structure

Domene, Carmen, Furini, Simone

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 45 KB

english, 2014

46

The Gp41 Sequence Connecting Mper and Tm Domains Constitutes a Distinct HIV-1 “Fusion Peptide” Targeted by Neutralizing Antibodies

Apellaniz, Beatriz, Serrano, Soraya, Huarte, Nerea, Domene, Cármen, Jiménez, M. Ángeles, Nieva, José L.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 56 KB

english, 2014

47

Nonselective Conduction in a Mutated NaK Channel with Three Cation-Binding Sites

Furini, Simone, Domene, Carmen

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 1.00 MB

english, 2012

48

Development of GoSlo-SR-5-69, a potent activator of large conductance Ca2+-activated K+ (BK) channels

Roy, Subhrangsu, Large, Roddy J., Akande, Adebola Morayo, Kshatri, Aravind, Webb, Tim I., Domene, Carmen, Sergeant, Gerard P., McHale, Noel G., Thornbury, Keith D., Hollywood, Mark A.

Journal:

European Journal of Medicinal Chemistry

Year:

2014

Language:

english

File:

PDF, 3.16 MB

english, 2014

49

On Conduction and Gating in K+-Channels

Domene, Carmen, Furini, Simone

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 43 KB

english, 2011

50

Many-Body Effects and Simulations of Potassium Channels

Christopher J. Illingworth and Carmen Domene

Journal:

Proceedings Mathematical Physical & Engineering Sciences

Year:

2009

Language:

english

File:

PDF, 1.84 MB

english, 2009

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